|
|
R语言cBioPortal API数据服务的R接口getStudies()函数-中英文对照帮助文档
By MicroRbt Martinez PhD
R语言函数名：getStudies()
R语言函数功能：cBioPortal API数据服务的R接口
来自资源库：Bionconductor-software
getStudies()函数所属R语言包：所在R包具体名称、包功能的中英文双语描述见正文后面'--所在R语言包信息--'部分。
描述-----Description-----
This section of the documentation lists the functions that allow users to access the cBioPortal API. The main representation of the API can be obtained from the 'cBioPortal' function. The supporting functions listed here give access to specific parts of the API and allow the user to explore the API with individual calls. Many of the functions here are listed for documentation purposes and are recommended for advanced usage only. Users should only need to use the 'cBioPortalData' main function to obtain data.
文档的此部分列出了允许用户访问cBioPortal API的功能。 API的主要表示形式可以从“ cBioPortal”功能获得。此处列出的支持功能使您可以访问API的特定部分，并允许用户通过单独的调用来探索API。此处列出的许多功能仅供参考，建议仅用于高级用途。用户只需要使用'cBioPortalData'主要功能即可获取数据。
使用方法-----Usage-----
cBioPortal()
getStudies(api)
clinicalData(api, studyId = NA_character_)
molecularProfiles(
api,
studyId = NA_character_,
projection = c("SUMMARY", "ID", "DETAILED", "META")
)
molecularData(
api,
molecularProfileId = NA_character_,
entrezGeneIds = NULL,
sampleIds = NULL,
check = TRUE
)
searchOps(api, keyword)
geneTable(api, ...)
samplesInSampleLists(api, sampleListIds = NA_character_, check = TRUE)
sampleLists(api, studyId = NA_character_)
allSamples(api, studyId = NA_character_)
genePanels(api)
getGenePanel(api, genePanelId = NA_character_)
genePanelMolecular(
api,
molecularProfileId = NA_character_,
sampleListId = NULL,
sampleIds = NULL
)
getGenePanelMolecular(api, molecularProfileIds = NA_character_, sampleIds)
getSampleInfo(
api,
studyId = NA_character_,
sampleListIds = NULL,
projection = c("SUMMARY", "ID", "DETAILED", "META")
)
getDataByGenePanel(
api,
studyId = NA_character_,
genePanelId = NA_character_,
molecularProfileId = NULL,
sampleListId = NULL,
check = TRUE
)
参数-----Arguments-----
参数api介绍: An API object of class 'cBioPortal' from the 'cBioPortal' function
来自'cBioPortal'函数的'cBioPortal'类的API对象
参�
-----未完，待续-----，↓↓↓展开剩余72%↓↓↓
|
购买主题
前行需要您的支持，请赞助作者 【15 金钱】 就能浏览全部100%内容啦！ （本贴一次赞助、永久可读）
|
发表于 2021-2-21 11:06:30
